beta-L-arabinopyranose-1-phosphate

Config Rule :

% 'beta-L-arabinopyranose-1-phosphate'


config('beta-L-arabinopyranose-1-phosphate',[
        ring([
                car(1,phosphate&&hyd),
                car(2,hyd&&hydroxyl),
                car(3,hydroxyl&&hyd),
                car(4,hydroxyl&&hyd),
                car(5,hyd&&hyd),
                oxy])]).

Smiles String :

[C@2H]-1([O][C@2H2][C@2H]([C@2H]([C@2H]-1[OH])[OH])[OH])[O][P@2](=[O])([O-])[O-_
]

'beta-L-arabinopyranose-1-phosphate'

Fischer Diagram :

Terminal :

% 'beta-L-arabinopyranose-1-phosphate'

c(1,12,(0,chiral))-[c(2,left)~,o(5,right)~,o(1,up)~,h(1,down)~],
c(2,12,(0,chiral))-[c(3,left)~,c(1,right)~,h(2,up)~,o(2,down)~],
c(3,12,(0,chiral))-[c(4,left)~,c(2,right)~,o(3,up)~,h(4,down)~],
c(4,12,(0,chiral))-[c(5,left)~,c(3,right)~,o(4,up)~,h(6,down)~],
c(5,12,(0,nonchiral))-[o(5,left)~,c(4,right)~,h(8,up)~,h(9,down)~],
h(1,1,(0,nonchiral))-[c(1,up)~],
h(2,1,(0,nonchiral))-[c(2,down)~],
h(3,1,(0,nonchiral))-[o(2,nil)~],
h(4,1,(0,nonchiral))-[c(3,up)~],
h(5,1,(0,nonchiral))-[o(3,nil)~],
h(6,1,(0,nonchiral))-[c(4,up)~],
h(7,1,(0,nonchiral))-[o(4,nil)~],
h(8,1,(0,nonchiral))-[c(5,down)~],
h(9,1,(0,nonchiral))-[c(5,up)~],
o(1,16,(0,nonchiral))-[p(1,right)~,c(1,down)~],
o(2,16,(0,nonchiral))-[h(3,nil)~,c(2,up)~],
o(3,16,(0,nonchiral))-[h(5,nil)~,c(3,down)~],
o(4,16,(0,nonchiral))-[h(7,nil)~,c(4,down)~],
o(5,16,(0,nonchiral))-[c(1,left)~,c(5,right)~],
o(6,16,(-6.666666666666666E-01,nonchiral))-[p(1,left)?],
o(7,16,(-6.666666666666666E-01,nonchiral))-[p(1,up)?],
o(8,16,(-6.666666666666666E-01,nonchiral))-[p(1,down)?],
p(1,31,(0,nonchiral))-[o(1,left)~,o(6,right)?,o(8,up)?,o(7,down)?]

The Terminals for all the Config Rules are in Prolog Definite Clause Grammar (DCG) form.They can be checked in the Manual here.

The compound's PDB file can be seen here.

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